Molecular Genetics Laboratory: Research Tools.

Cold Spring Harbor (CSH) guide Great overview of how biologists can use Genetics databases.

Guide to Molecular Biology Databases. Provides specific information regarding access to biological sequence information.

Guide to biosequence comparison Biosequence comparison documents.

Guide to Sequence Analysis. By Andrew Louka. Aimed at people who want to learn the practical side of sequence analysis, but have no experience of this field at all.

EC Enzyme Database at JHU. Contains EC number, names, catalytic activity, cofactors, pointers to the SWISS-PROT entries...
ENZYME at ExPASy. The Enzyme Data Bank.
Enzyme Structures Database from the BSM Group at UCL. Enzyme structures contained in the PDB.
REBASE at JHU. The Restriction Enzyme Database.
WebCutter by Max Heiman. An on-line tool for restriction mapping nucleotide sequences.

ALIGN at EERIE-Nimes. Optimal Global Alignment of Two Sequences with No Short-cuts.
Amino Acid Analysis Server at EMBL. Protein Identification in SwissProt/PIR using Amino Acid Composition.
Organisms and Strains at Biotech-Indiana. A Guide to Germplasm Repositories and Culture Collections on the Internet.
Dot Plot at the Virtual Genome Center (UM). Compare a sequence with itself.
Grail 1.3, Computational Biosciences at Oak Ridge National laboratory. Gene Recognition and Assembly Internet Link.
GuessProt at ExPASy. Retrieve SWISS-PROT entries closest to a given pI and Mw.
MassSearch at CBRG. Searching SwissProt or EMBL by protein mass after digestion.
Mfold at Prof. M. Zuker's Server. Prediction of RNA secondary structure by energy minimization.
ORF at the Virtual Genome Center (UM). Identify ORF in large genomic sequences.
RNA Secondary Structures. Information on Group I Introns and rRNA.
SAPS at the Norwegian EMBnet node. Statistical Analysis of Protein Sequences on the WWW .
STS Pipeline v1.2 from the Whitehead Institute/MIT. Automated analysis and STS primer picking of short DNA sequences.
SWISS-2DPAGE at ExPASy. Two-dimensional polyacrylamide gel electrophoresis database.